Skip to content
Free Trial
  1. Home
  2. Blog
  3. Recipes
  4. Breakfast

Keto Carrot Cheesecake Muffins

  • Ready in 45m
  • 3.5 g net carbs
  • 273 kcal
  • Serves 9
Jump to recipe ↓

This post may contain affiliate links, see our disclaimer.

Carrot Cheesecake Muffins (low-carb, keto, primal)

Nothing says holidays like the smell of freshly baked carrot cake. Add a layer of vanilla-flavoured cheesecake and you end up with the perfect keto treat everyone will love, even your non-keto friends!

Looking for more recipes for the holiday season? Try some of these:

Step-by-step

  1. Preheat the oven to 160 °C/ 320 °F. Line a muffin tray with 9 medium muffin paper cups. Grease each cup with a small amount of coconut oil or ghee. Prepare the cheesecake layer by whisking the cream cheese, egg yolk, powdered Erythritol and vanilla powder. Set aside.

    Carrot Cheesecake Muffins (low-carb, keto, primal)
  2. Place all the dry muffin ingredients - apart from the pecans - into a bowl and combine well.
    I make my own chia seed meal by blending it in a food processor for just a few seconds until powdered.

    Carrot Cheesecake Muffins (low-carb, keto, primal)
  3. Finely grate the carrot and roughly chop the pecans. Set aside.

    Carrot Cheesecake Muffins (low-carb, keto, primal)
  4. Separate the egg whites from the egg yolks. In a bowl, using a hand beater or electric mixer), whip up the four egg whites until they create soft peaks.
    Place the four egg yolks into a bowl and add the leftover egg white from the cheesecake layer. Add melted coconut oil, stevia and process until smooth (the coconut oil should be melted and cooled, don't use hot oil). Process until well combined and start adding the dry mixture - a tablespoon or two at a time while mixing.

    Carrot Cheesecake Muffins (low-carb, keto, primal)
  5. Add a quarter of the whipped egg whites and mix gently. Add the remaining egg whites and fold in the batter using the slow setting on your mixer or using a spatula.

    Carrot Cheesecake Muffins (low-carb, keto, primal)
  6. Be careful not to deflate the egg whites and keep the batter as fluffy as you can. Add the carrot and pecans and slowly fold in.

    Carrot Cheesecake Muffins (low-carb, keto, primal)
  7. Spoon the batter into the paper cups and using a small spoon, create small wells in the centre of the muffing mixture.

    Carrot Cheesecake Muffins (low-carb, keto, primal)
  8. Fill each muffin with a heaping tablespoon of the reserved cheesecake mixture (about an ounce / 30 grams per muffin). Transfer into the oven and bake for 30-35 minutes or until the tops are set and golden brown.

    Carrot Cheesecake Muffins (low-carb, keto, primal)
  9. When done, remove from the oven and place on a cooling rack. Then, place in an airtight container and keep in the fridge for up to 3 days, or store in the freezer for up to 3 months. Enjoy!

    Carrot Cheesecake Muffins (low-carb, keto, primal)
Keto Carrot Cheesecake Muffins

Recipe

Keto Carrot Cheesecake Muffins

★★★★☆4.4 (56 ratings)

Nothing says holidays like the smell of freshly baked carrot cake. Add a layer of vanilla-flavoured cheesecake ...

Hands on
10m
Overall
45m
Servings
9
3.5 g
Net carbs
7.3 g
Protein
25.7 g
Fat
273
kcal
PinRate

Ingredients makes 9 muffins

  • Cheesecake layer:
  • Dry muffin ingredients:
  • Wet muffin ingredients:

Instructions

  1. Preheat the oven to 160 °C/ 320 °F. Line a muffin tray with 9 medium muffin paper cups. Grease each cup with a small amount of coconut oil or ghee. Prepare the cheesecake layer by whisking the cream cheese, egg yolk, powdered Erythritol and vanilla powder. Set aside.

  2. Place all the dry muffin ingredients - apart from the pecans - into a bowl and combine well.
    I make my own chia seed meal by blending it in a food processor for just a few seconds until powdered.

  3. Finely grate the carrot and roughly chop the pecans. Set aside.

  4. Separate the egg whites from the egg yolks. In a bowl, using a hand beater or electric mixer), whip up the four egg whites until they create soft peaks.
    Place the four egg yolks into a bowl and add the leftover egg white from the cheesecake layer. Add melted coconut oil, stevia and process until smooth (the coconut oil should be melted and cooled, don't use hot oil). Process until well combined and start adding the dry mixture - a tablespoon or two at a time while mixing.

  5. Add a quarter of the whipped egg whites and mix gently. Add the remaining egg whites and fold in the batter using the slow setting on your mixer or using a spatula.

  6. Be careful not to deflate the egg whites and keep the batter as fluffy as you can. Add the carrot and pecans and slowly fold in.

  7. Spoon the batter into the paper cups and using a small spoon, create small wells in the centre of the muffing mixture.

  8. Fill each muffin with a heaping tablespoon of the reserved cheesecake mixture (about an ounce / 30 grams per muffin). Transfer into the oven and bake for 30-35 minutes or until the tops are set and golden brown.

  9. When done, remove from the oven and place on a cooling rack. Then, place in an airtight container and keep in the fridge for up to 3 days, or store in the freezer for up to 3 months. Enjoy!

Nutrition per muffin

Carbs 5%Protein 11%Fat 84% of calories

Net carbs
3.5 g
Total carbs
13.2 g
Fiber
2.4 g
Sugars
2.3 g
Protein
7.3 g
Fat
25.7 g
Saturated fat
13.7 g
Calories
273 kcal
Sodium
269 mg · 11.7% RDA
Magnesium
30 mg · 7.47% RDA
Potassium
170 mg · 8.49% EMR
Nutrition by ingredient

Serving size muffin

  • Gluten free
  • Nightshade free
  • Pork free
  • Avocado free
  • Fish free
  • Shellfish free
  • Beef free
  • Pescatarian
  • Vegetarian

Comments & ratings (17)

4.456 ratings
  • 5 ★35
  • 4 ★15
  • 3 ★3
  • 2 ★1
  • 1 ★2

Leave a comment

Made this? Rate it

Comments appear after we've read them.

Comment received

  1. Kathleen Thaler

    I loved this recipe, similar flavours to carrot cake with cream cheese frosting. Yummy! It was a bit labour intensive and used up a ton of bowls and counter space, but worth the effort. Thanks for sharing.

    1. Martina @ KetoDietAuthor

      Thank you Kathleen!

  2. Marc

    Made this for our Thanksgiving dessert, and it was very good. There was quite a bit of prep, so will probably default to the cinnamon mug cake in the future (which is also very good and only takes a few minutes to make) 😀

    1. Martina @ KetoDietAuthor

      Thank you for your lovely feedback! ❤️

  3. Ann Seibert

    I made this recipe and LOVED it! However, I'm wondering if it might be possible to boost the protein a bit by adding protein powder to the recipe. Any ideas on how to do that?
    Oh, I also snapped a great picture (IMO). I added some shredded carrot and a pecan half to the top of the muffin. They look great and taste even better!
    facebook.com/photo.php

    1. Martina @ KetoDietAuthor

      Thank you for your kind words Ann! Yes, you could use an additional 1/4 cup protein powder, plus you will need to use about 1/4 cup almond milk. The additional protein powder will also help the muffins rise. I think the photo may be private because it doesn't seem to be working?

    2. Ann Seibert

      Thanks for the info. I'm going to make them again with the protein powder!
      Sorry about the photo link. I posted it to Facebook. It's probably because we're not connected as friends.
      Here's a link to the photo on Box:
      https://anamorphics.box.com/s/awntujhu9wdlup7esv0w7asdjcqrf89f
      Feel free to use it. I thought it turned out nicely for a snap taken on my iPhone. 😊
      Ann

      1. Martina @ KetoDietAuthor

        Thank you Ana, they look fantastic! I think that at some point we should enable photo uploads so that people can share their creations 😊

  4. Emily

    These are amazing! I tweaked them a little and used the pumpkin cheesecake topping from your cheese bread. We have two picky eaters in our family and they both really like them. Thank you!

    1. Martina @ KetoDietAuthor

      Thank you Emily, that sounds great, I need to try them with the pumpkin/orange topping! 😊

  5. Simona

    Hi Martina,
    can you make me an example of a 'full-fat cream cheese', I don't know which one to use.
    Thanks a lot

    1. Martina @ KetoDietAuthor

      Hi Simona, I used Philadelphia cream cheese (the "Original" one with 21.5 g fat per 100 g).

    2. thanks!Simona

      Thanks!

  6. Jill

    This looks fantastic! I don't have carrots, but I do have pumpkin and I am going to put this great sounding topping on your Pumpkin Chia Muffins!!!!

    1. Martina @ KetoDietAuthor

      Sounds perfect to me! Let me know how they turned out 😊

      1. Jill

        These turned out great! The spices went well with the cream cheese topping! This is going to be one of my go-to recipes! Now for your next trick...how about a banana walnut muffin?!

        1. Martina @ KetoDietAuthor

          Thank you Jill! I love those flavours but I don't cook with bananas (not for keto)... banana extract may work though 😊

My go-to recipes for stress-free meal prep

⭐️ FREE EMAIL BONUS ⭐️
Easy, filling, high-protein meals I make on repeat to save time & keep it simple.