Skip to content
Free Trial
  1. Home
  2. Blog
  3. Recipes
  4. Desserts

Keto Pumpkin Cheesecake Swirl Brownies

  • Ready in 40m
  • 5.1 g net carbs
  • 270 kcal
  • Serves 9
Jump to recipe ↓

This post may contain affiliate links, see our disclaimer.

Keto Pumpkin Cheesecake Swirl Brownies (low-carb, sugar-free, grain-free)

Brownies or cheesecake? Don’t ask me to choose — I’ll always say both. These keto pumpkin cheesecake swirl brownies bring the best of everything together in one pan: fudgy low-carb brownies swirled with a creamy, spiced pumpkin cheesecake layer.

I love making these in the fall when pumpkin spice is everywhere, but honestly, they’re too good to save for just one season. They’re sugar-free, grain-free, and keto-friendly, so you can enjoy a square (or two) without the carb crash.

Brownies, But Better

  • Two desserts in one – Rich fudgy keto brownies swirled with creamy pumpkin cheesecake for the ultimate fall treat.
  • Perfect texture – Soft, moist, and decadent without being dry or crumbly.
  • Keto-friendly – Just 5 g net carbs per slice, completely sugar-free and low-carb.
  • Nut-free option – Easily swap almond flour and almond milk to make these brownies 100% nut-free.
  • Crowd-pleaser – They look bakery-worthy but are simple enough for a weeknight bake.

Ingredients & Swaps

  • Cream cheese – Full-fat for the creamiest cheesecake layer.
  • Pumpkin purée – Unsweetened, not pumpkin pie filling with sugar. Canned or homemade pumpkin puree both work.
  • Sweetener – Erythritol, Swerve, or Allulose. Adjust to taste; Allulose will keep the brownies extra moist and fudgy.
  • Almond flour – Finely ground, blanched almond flour gives structure. For nut-free, use ground sunflower seeds.
  • Cocoa powder – Dutch-process cocoa gives deeper flavor; raw cacao works too.
  • Butter – Unsalted, melted. For dairy-free, swap with coconut oil or ghee.
  • Eggs – Bind both the cheesecake and brownie layers. Large eggs work best.
  • Spices – Cinnamon and nutmeg for the cheesecake swirl; adjust to taste or add pumpkin spice blend. Here's my favorite homemade pumpkin spice mix.
  • Almond milk – Just a splash keeps the brownie batter smooth. For nut-free, use coconut milk or even water.

Can I use coconut flour instead of almond flour?

No, coconut flour won’t work as a 1:1 substitute here. It’s far more absorbent than almond flour and would make the brownie layer dry and crumbly. If you need a nut-free option, use finely ground sunflower seed flour instead — it behaves much closer to almond flour in recipes.

Top Tips from My Kitchen

  • Room-temp ingredients work best – Cold cream cheese or eggs may give you lumpy cheesecake batter.
  • Don’t over-swirl – Less is more. A few swoops with a knife will give you those pretty marbled ribbons without blending the layers together. Ypu don't want to lose the pretty pattern!
  • Check doneness early – Every oven is different. Start checking at 20 minutes so the brownies stay fudgy and don’t dry out.
  • Cool completely before slicing – The cheesecake layer really needs time to set, otherwise you’ll end up with messy slices. It will all be worth the wait!

Storage & Make Ahead

Once baked, let the brownies cool completely before slicing. Store them in an airtight container in the refrigerator for up to 5 days. For longer storage, freeze individual slices on a lined tray, then transfer to a freezer-safe bag or container. They’ll keep well for up to 3 months — just thaw overnight in the fridge before serving.

Pumpkin Low-Carb Desserts You’ll Love

If you loved the flavor combo in these pumpkin cheesecake swirl brownies, you’ll want to try these other cozy low-carb treats. Each one brings a little seasonal comfort — without all the sugar!

Step-by-step

  1. Preheat the oven to 155 °C/ 310 °F (fan assisted), or 175 °C/ 350 °F (conventional).

    Keto Pumpkin Cheesecake Swirl Brownies (low-carb, sugar-free, grain-free)
  2. Grease and line a 20 x 20 cm (8 x 8 inch) square cake pan.

  3. Place all of the cheesecake layer ingredients into a blender (cream cheese, sweetener, egg, cinnamon, nutmeg and pumpkin puree) and blitz until smooth.

    Keto Pumpkin Cheesecake Swirl Brownies (low-carb, sugar-free, grain-free)
  4. Melt the butter for the brownie layer in a microwave safe jug or bowl.

  5. Place all of the dry brownie ingredients in a medium bowl and mix until well combined, without lumps.

  6. Add in the eggs, melted butter and vanilla extract and mix until smooth.

    Keto Pumpkin Cheesecake Swirl Brownies (low-carb, sugar-free, grain-free)
  7. Pour the brownie batter into the pan, reserving approx. 1/2 cup and smooth over with a spoon.

  8. Gently pour the cheesecake layer on top.

    Keto Pumpkin Cheesecake Swirl Brownies (low-carb, sugar-free, grain-free)
  9. Mix the remaining brownie batter with 2 tablespoons of almond milk.

  10. Spoon the remaining brownie batter on top in 4 dollops then use a knife to swirl the batter into the cheesecake. Don’t over swirl or you won’t get defined patterns.

  11. Bake for 20-25 minutes until set.

    Keto Pumpkin Cheesecake Swirl Brownies (low-carb, sugar-free, grain-free)
  12. Remove from the oven and let cool completely before slicing into 9 pieces. Store in an airtight container in the refrigerator for up to 5 days.

    Keto Pumpkin Cheesecake Swirl Brownies (low-carb, sugar-free, grain-free)
Keto Pumpkin Cheesecake Swirl Brownies

Recipe

Keto Pumpkin Cheesecake Swirl Brownies

★★★★★4.7 (59 ratings)

Keto pumpkin cheesecake brownies with a fudgy swirl. A sugar-free, low-carb treat that combines pumpkin pie ...

Hands on
15m
Overall
40m
Servings
9
5.1 g
Net carbs
8.2 g
Protein
25.6 g
Fat
270
kcal
PinRate

Ingredients makes 9 servings

  • Cheesecake Layer:
  • Brownie layer:

Instructions

  1. Preheat the oven to 155 °C/ 310 °F (fan assisted), or 175 °C/ 350 °F (conventional).

  2. Grease and line a 20 x 20 cm (8 x 8 inch) square cake pan.

  3. Place all of the cheesecake layer ingredients into a blender (cream cheese, sweetener, egg, cinnamon, nutmeg and pumpkin puree) and blitz until smooth.

  4. Melt the butter for the brownie layer in a microwave safe jug or bowl.

  5. Place all of the dry brownie ingredients in a medium bowl and mix until well combined, without lumps.

  6. Add in the eggs, melted butter and vanilla extract and mix until smooth.

  7. Pour the brownie batter into the pan, reserving approx. 1/2 cup and smooth over with a spoon.

  8. Gently pour the cheesecake layer on top.

  9. Mix the remaining brownie batter with 2 tablespoons of almond milk.

  10. Spoon the remaining brownie batter on top in 4 dollops then use a knife to swirl the batter into the cheesecake. Don’t over swirl or you won’t get defined patterns.

  11. Bake for 20-25 minutes until set.

  12. Remove from the oven and let cool completely before slicing into 9 pieces. Store in an airtight container in the refrigerator for up to 5 days.

Nutrition per serving, 1 slice

Carbs 7%Protein 12%Fat 81% of calories

Net carbs
5.1 g
Total carbs
29.9 g
Fiber
4 g
Sugars
3 g
Protein
8.2 g
Fat
25.6 g
Saturated fat
13 g
Calories
270 kcal
Sodium
250 mg · 10.8% RDA
Magnesium
66 mg · 16.5% RDA
Potassium
260 mg · 13% EMR
Nutrition by ingredient

Serving size 1 slice

  • Gluten free
  • Nut free
  • Nightshade free
  • Pork free
  • Avocado free
  • Coconut free
  • Fish free
  • Shellfish free
  • Beef free
  • Pescatarian
  • Vegetarian

Comments & ratings (9)

4.759 ratings
  • 5 ★48
  • 4 ★8
  • 3 ★1
  • 2 ★1
  • 1 ★1

Leave a comment

Made this? Rate it

Comments appear after we've read them.

Comment received

  1. Jenny★★★★★

    I first saw this on Pinterest and thought.... that must be hard to make. Turns out it's not at all and I'm baking it as we speak 😊 I had to lick the spoon a few times and I know this will be amazing.

  2. Alicia23

    This recipe looks absolutely delish! Combining pumpkin, cheesecake, and brownies—I’m in love. I appreciate the nut-free options for us with allergies! ❤️

    1. Martina @ KetoDietAuthor

      ❤️

  3. Emma2050

    These are amazing! I was a bit skeptical if I can make them look this pretty but it was actually really easy. I wish I could share a photo here!

    1. Martina @ KetoDietAuthor

      So happy you enjoyed them! I may add this feature at some point!

  4. Sophie88

    I couldn't wait for September and made these on Sunday. O-M-G! I can't believe how delicious these are. Now I'm obsessed with the cheesecake-brownie combo. You'll need to share more of these haha! 😊

    1. Martina @ KetoDietAuthor

      You never have to wait for September to enjoy pumpkin treats! I don't 😊 There's another one you may like:
      Raspberry Cheesecake Keto Brownies
      And also these for Halloween: Halloween Cheesecake Keto Brownies

  5. EmilyMae08

    These brownies look so yummy! I love the idea of combining cheesecake with brownies. It's my two favorite desserts. Thanks!

    1. Martina @ KetoDietAuthor

      Mine too! 😉

My go-to recipes for stress-free meal prep

⭐️ FREE EMAIL BONUS ⭐️
Easy, filling, high-protein meals I make on repeat to save time & keep it simple.